1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.21G040300.1

Ceric.21G040300.1 (Ceric.21G040300)


Aliases : Ceric.21G040300

Description : bHLH-type transcription factor & original description: pacid=50603794 polypeptide=Ceric.21G040300.1.p locus=Ceric.21G040300 ID=Ceric.21G040300.1.v2.1 annot-version=v2.1


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.21G040300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AMTR_s00089p00043950 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G72210 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G46690 bHLH071 beta HLH protein 71 0.04 OrthoFinder output from all 47 species
Aev_g10535 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10924 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25773 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03090 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10378 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27262 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04490 FMA bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09821 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18861.t1 FMA, Aspi01Gene18861 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50659.t1 FMA, Aspi01Gene50659 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53774.t1 SPCH, Aspi01Gene53774 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene60129.t1 FMA, Aspi01Gene60129 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010552 FMA bHLH-type transcription factor & original description: CDS=1-1698 0.05 OrthoFinder output from all 47 species
Azfi_s0129.g048899 MUTE bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Cba_g00995 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06394 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G037700.1 Ceric.18G037700 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12824 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02905 FMA bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17824 FMA bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g04294 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05220 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05942 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10264 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18918 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30290 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027446001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01028719001 SPCH RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_01096 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_17233 FMA transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os02g46560.1 LOC_Os02g46560 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os03g03000.1 LOC_Os03g03000 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50090.1 LOC_Os04g50090 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50900.1 FMA, LOC_Os05g50900 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37730.1 LOC_Os08g37730 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os09g29360.1 LOC_Os09g29360 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Lfl_g35034 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_141469g0010 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_686524g0010 FMA transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g26213 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31314 FMA bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10985 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11060 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15543 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27393 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63342 FMA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63346 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000446 No alias bHLH-type transcription factor & original description: CDS=1-1233 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013314 FMA bHLH-type transcription factor & original description: CDS=1-1482 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021350 FMA bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g07999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28288 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc12g087850.3.1 Solyc12g087850 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g47856 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52685 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07072 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000657_P002 Zm00001e000657 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e003394_P001 Zm00001e003394 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e009989_P001 Zm00001e009989 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e015494_P002 Zm00001e015494 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e023271_P001 Zm00001e023271 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e023838_P003 Zm00001e023838 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e041403_P001 Zm00001e041403 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 348 398
No external refs found!