Aliases : SMC5, Ceric.21G036900
Description : component *(SMC5) of homologous recombination repair Smc5-Smc6 complex & original description: pacid=50602853 polypeptide=Ceric.21G036900.1.p locus=Ceric.21G036900 ID=Ceric.21G036900.1.v2.1 annot-version=v2.1
Gene families : OG0004405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G15920 | SMC5 | structural maintenance of chromosomes 5 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g012781 | SMC5 | component *(SMC5) of homologous recombination repair... | 0.02 | OrthoFinder output from all 47 species | |
Als_g27000 | SMC5 | component *(SMC5) of homologous recombination repair... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g11568 | SMC5 | component *(SMC5) of homologous recombination repair... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032195001 | SMC5 | DNA damage response.DNA repair mechanisms.homologous... | 0.05 | OrthoFinder output from all 47 species | |
Gb_33241 | SMC5 | component SMC5 of homologous recombination repair... | 0.05 | OrthoFinder output from all 47 species | |
MA_10432022g0010 | SMC5 | Structural maintenance of chromosomes protein 5... | 0.03 | OrthoFinder output from all 47 species | |
MA_114320g0010 | SMC5 | Structural maintenance of chromosomes protein 5... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g40490 | No alias | component *(SMC5) of homologous recombination repair... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e013059_P001 | SMC5, Zm00001e013059 | component SMC5 of homologous recombination repair... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003395 | RecF/RecN/SMC_N | 41 | 1008 |
No external refs found! |