Ceric.21G036900.1 (SMC5, Ceric.21G036900)


Aliases : SMC5, Ceric.21G036900

Description : component *(SMC5) of homologous recombination repair Smc5-Smc6 complex & original description: pacid=50602853 polypeptide=Ceric.21G036900.1.p locus=Ceric.21G036900 ID=Ceric.21G036900.1.v2.1 annot-version=v2.1


Gene families : OG0004405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004405_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.21G036900.1

Target Alias Description ECC score Gene Family Method Actions
AT5G15920 SMC5 structural maintenance of chromosomes 5 0.04 OrthoFinder output from all 47 species
Adi_g012781 SMC5 component *(SMC5) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Als_g27000 SMC5 component *(SMC5) of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
Cba_g11568 SMC5 component *(SMC5) of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
GSVIVT01032195001 SMC5 DNA damage response.DNA repair mechanisms.homologous... 0.05 OrthoFinder output from all 47 species
Gb_33241 SMC5 component SMC5 of homologous recombination repair... 0.05 OrthoFinder output from all 47 species
MA_10432022g0010 SMC5 Structural maintenance of chromosomes protein 5... 0.03 OrthoFinder output from all 47 species
MA_114320g0010 SMC5 Structural maintenance of chromosomes protein 5... 0.05 OrthoFinder output from all 47 species
Sam_g40490 No alias component *(SMC5) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Zm00001e013059_P001 SMC5, Zm00001e013059 component SMC5 of homologous recombination repair... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 41 1008
No external refs found!