Ehy_g00957


Description : not classified & original description: none


Gene families : OG0000833 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000833_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g00957

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00236350 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.05 OrthoFinder output from all 47 species
Aev_g07025 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Aev_g07107 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Ala_g14907 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Als_g00760 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Als_g01479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43713 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Aob_g35125 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.06 OrthoFinder output from all 47 species
Aop_g06045 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25229.t2 Aspi01Gene25229 deadenylase component *(CAF1) of mRNA deadenylation... 0.05 OrthoFinder output from all 47 species
Aspi01Gene33059.t1 Aspi01Gene33059 deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Aspi01Gene64156.t1 Aspi01Gene64156 deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68835.t1 Aspi01Gene68835 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0075.g037558 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Cba_g06366 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Cba_g08602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G056100.1 Ceric.05G056100 deadenylase component *(CAF1) of mRNA deadenylation... 0.09 OrthoFinder output from all 47 species
Dac_g02678 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.05 OrthoFinder output from all 47 species
Dcu_g01208 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Dde_g02762 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Dde_g19185 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Ehy_g00624 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03366 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.05 OrthoFinder output from all 47 species
GSVIVT01035897001 No alias Probable CCR4-associated factor 1 homolog 10... 0.06 OrthoFinder output from all 47 species
Gb_19103 No alias deadenylase component CAF1 of CCR4-NOT complex 0.06 OrthoFinder output from all 47 species
LOC_Os02g55300.1 LOC_Os02g55300 Probable CCR4-associated factor 1 homolog 7... 0.02 OrthoFinder output from all 47 species
LOC_Os09g24990.2 LOC_Os09g24990 Probable CCR4-associated factor 1 homolog 7... 0.03 OrthoFinder output from all 47 species
Len_g17479 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Len_g20084 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Lfl_g03678 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g24939 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_127412g0020 No alias Probable CCR4-associated factor 1 homolog 7... 0.04 OrthoFinder output from all 47 species
MA_205414g0010 No alias Probable CCR4-associated factor 1 homolog 7... 0.03 OrthoFinder output from all 47 species
Msp_g09969 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.06 OrthoFinder output from all 47 species
Nbi_g01805 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Ore_g08887 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.06 OrthoFinder output from all 47 species
Ore_g27312 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.06 OrthoFinder output from all 47 species
Pir_g11620 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Ppi_g14365 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006359 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Smo444748 No alias Probable CCR4-associated factor 1 homolog 6... 0.02 OrthoFinder output from all 47 species
Spa_g06339 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.06 OrthoFinder output from all 47 species
Tin_g02569 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030328 prenylcysteine catabolic process IEP HCCA
BP GO:0030329 prenylcysteine metabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 19 158
IPR006941 RNase_CAF1 181 241
No external refs found!