Aliases : GTB1, Ceric.21G005900
Description : component *(SPT6) of SPT6-IWS1 transcription elongation complex & original description: pacid=50604068 polypeptide=Ceric.21G005900.1.p locus=Ceric.21G005900 ID=Ceric.21G005900.1.v2.1 annot-version=v2.1
Gene families : OG0001807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001807_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00038p00136890 | GTB1,... | Chromatin organisation.histone chaperone... | 0.05 | OrthoFinder output from all 47 species | |
AT1G65440 | GTB1 | global transcription factor group B1 | 0.07 | OrthoFinder output from all 47 species | |
Adi_g055496 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.06 | OrthoFinder output from all 47 species | |
Aev_g43821 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g25347 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.09 | OrthoFinder output from all 47 species | |
Ala_g37718 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.07 | OrthoFinder output from all 47 species | |
Als_g14097 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g17694 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.13 | OrthoFinder output from all 47 species | |
Aob_g20381 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.09 | OrthoFinder output from all 47 species | |
Aop_g31491 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0351.g066576 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001486.8 | GTB1 | Chromatin organisation.histone chaperone... | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g403182 | GTB1 | Chromatin organisation.histone chaperone... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g22241 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g14255 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.11 | OrthoFinder output from all 47 species | |
Dcu_g19973 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g17217 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01012381001 | GTB1 | Chromatin organisation.histone chaperone... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01025815001 | GTB1 | Chromatin organisation.histone chaperone... | 0.07 | OrthoFinder output from all 47 species | |
Gb_29261 | GTB1 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g41510.1 | GTB1, LOC_Os05g41510 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.07 | OrthoFinder output from all 47 species | |
Len_g19196 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g05758 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.06 | OrthoFinder output from all 47 species | |
MA_13648g0020 | GTB1 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.06 | OrthoFinder output from all 47 species | |
Mp2g25720.1 | GTB1 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.07 | OrthoFinder output from all 47 species | |
Msp_g42177 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g43712 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g05486 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g08934 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g03432 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g60722 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g13993 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Smo164675 | GTB1 | Chromatin organisation.histone chaperone... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g081020.2.1 | GTB1, Solyc10g081020 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g16432 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g02913 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e032018_P003 | GTB1, Zm00001e032018 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.13 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0043022 | ribosome binding | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140612 | DNA damage sensor activity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |