Aliases : emb1629, APO2, Ceric.20G080200
Description : organelle RNA splicing factor *(APO) & original description: pacid=50567598 polypeptide=Ceric.20G080200.1.p locus=Ceric.20G080200 ID=Ceric.20G080200.1.v2.1 annot-version=v2.1
Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.20G080200.1 | |
Cluster | HCCA: Cluster_121 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00189370 | APO1,... | APO protein 1, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g25543 | APO1 | organelle RNA splicing factor *(APO) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Len_g03244 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No external refs found! |