Aliases : EDF2, AtRAV2, TEM2, RAV2, RAP2.8, Ceric.20G072500
Description : AP2-RAV-type transcription factor *(EDF) & original description: pacid=50566316 polypeptide=Ceric.20G072500.1.p locus=Ceric.20G072500 ID=Ceric.20G072500.1.v2.1 annot-version=v2.1
Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00238950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | OrthoFinder output from all 47 species | |
AT2G46870 | NGA1 | AP2/B3-like transcriptional factor family protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G11580 | No alias | AP2/B3-like transcriptional factor family protein | 0.04 | OrthoFinder output from all 47 species | |
Aop_g20316 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0102.g044523 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g71540 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.22G022700.1 | TEM1, EDF1,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g39956 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g43760 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023582001 | No alias | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027463001 | NGA1 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
Gb_18035 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g04800.1 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g01860.1 | LOC_Os06g01860 | transcription factor (RAV/NGATHA) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os08g06120.1 | NGA1, LOC_Os08g06120 | transcription factor (RAV/NGATHA) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os10g39190.1 | NGA1, LOC_Os10g39190 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g05740.1 | LOC_Os11g05740 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g06080.1 | LOC_Os12g06080 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
MA_10428163g0010 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
MA_10436315g0020 | EDF4, RAV1 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
MA_20372g0020 | EDF4, RAV1 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g33705 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g49278 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g30092 | No alias | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g007000.2.1 | EDF4, RAV1,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g28812 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30531 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032325_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040214_P001 | NGA3, Zm00001e040214 | transcription factor (RAV/NGATHA) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
BP | GO:0010167 | response to nitrate | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0015706 | nitrate transmembrane transport | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0098661 | inorganic anion transmembrane transport | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901698 | response to nitrogen compound | IEP | HCCA |
BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
BP | GO:1902025 | nitrate import | IEP | HCCA |
No external refs found! |