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  5. Ceric.20G072300.1

Ceric.20G072300.1 (ASK2, SKP1B, Ceric.20G072300)


Aliases : ASK2, SKP1B, Ceric.20G072300

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: pacid=50567538 polypeptide=Ceric.20G072300.1.p locus=Ceric.20G072300 ID=Ceric.20G072300.1.v2.1 annot-version=v2.1


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G072300.1

Target Alias Description ECC score Gene Family Method Actions
AT3G21830 SK8, ASK8 SKP1-like 8 0.04 OrthoFinder output from all 47 species
AT3G21840 ASK7, SK7 SKP1-like 7 0.04 OrthoFinder output from all 47 species
AT3G21850 SK9, ASK9 SKP1-like 9 0.04 OrthoFinder output from all 47 species
AT3G21860 ASK10, SK10 SKP1-like 10 0.04 OrthoFinder output from all 47 species
AT4G34470 SK12, ASK12 SKP1-like 12 0.04 OrthoFinder output from all 47 species
Ceric.20G071200.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.20G072200.1 ASK2, SKP1B,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
GSVIVT01024014001 ASK1, ATSKP1,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os07g05150.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.05 OrthoFinder output from all 47 species
LOC_Os07g05160.1 ASK4, SK4, LOC_Os07g05160 target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
LOC_Os07g05180.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
LOC_Os07g43270.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.06 OrthoFinder output from all 47 species
LOC_Os08g28800.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28820.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
MA_99195g0010 ASK2, SKP1B target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
Mp5g10050.2 ASK2, SKP1B target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
Nbi_g29347 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g09622 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ppi_g09623 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g40477 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Smo98727 ASK1, ATSKP1,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 6 63
IPR016072 Skp1_comp_dimer 79 125
No external refs found!