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  5. Ceric.20G072200.1

Ceric.20G072200.1 (ASK2, SKP1B, Ceric.20G072200)


Aliases : ASK2, SKP1B, Ceric.20G072200

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: pacid=50566013 polypeptide=Ceric.20G072200.1.p locus=Ceric.20G072200 ID=Ceric.20G072200.1.v2.1 annot-version=v2.1


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G072200.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT3G21830 SK8, ASK8 SKP1-like 8 0.03 OrthoFinder output from all 47 species
AT3G21850 SK9, ASK9 SKP1-like 9 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007582 No alias not classified & original description: CDS=203-667 0.02 OrthoFinder output from all 47 species
Ceric.20G070800.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.20G071200.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ceric.20G071600.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.20G071800.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Ceric.20G072100.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.20G072300.1 ASK2, SKP1B,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
LOC_Os07g43180.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
LOC_Os07g43270.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
Nbi_g29347 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ppi_g09622 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 6 59
IPR016072 Skp1_comp_dimer 107 153
No external refs found!