1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.20G064900.1

Ceric.20G064900.1 (PRT1, Ceric.20G064900)


Aliases : PRT1, Ceric.20G064900

Description : type-II-residues E3 ubiquitin ligase *(PRT1) & original description: pacid=50567196 polypeptide=Ceric.20G064900.1.p locus=Ceric.20G064900 ID=Ceric.20G064900.1.v2.1 annot-version=v2.1


Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G064900.1

Target Alias Description ECC score Gene Family Method Actions
AT3G24800 PRT1 proteolysis 1 0.02 OrthoFinder output from all 47 species
Ala_g27452 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g40084 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028643001 PRT1 Protein degradation.N-end rule pathway of targeted... 0.06 OrthoFinder output from all 47 species
Sam_g22503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR027370 Znf-RING_euk 216 250
IPR000433 Znf_ZZ 316 353
No external refs found!