Ceric.20G001900.1 (Ceric.20G001900)


Aliases : Ceric.20G001900

Description : not classified & original description: pacid=50565969 polypeptide=Ceric.20G001900.1.p locus=Ceric.20G001900 ID=Ceric.20G001900.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G001900.1

Target Alias Description ECC score Gene Family Method Actions
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g004360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g014859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g019877 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g034782 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g065511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069020 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g084267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096243 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20987 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g37093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18385.t1 OTP82, Aspi01Gene18385 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59237.t1 Aspi01Gene59237 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008648 No alias not classified & original description: CDS=1-2118 0.05 OrthoFinder output from all 47 species
Azfi_s0034.g025337 DOT4 not classified & original description: CDS=145-3054 0.06 OrthoFinder output from all 47 species
Azfi_s0109.g045373 No alias not classified & original description: CDS=1-2985 0.07 OrthoFinder output from all 47 species
Cba_g07200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.06 OrthoFinder output from all 47 species
Dac_g21950 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g42967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60000.1 SLO1, LOC_Os01g60000 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
LOC_Os06g41040.1 LOC_Os06g41040 Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
Msp_g32485 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g56161 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002062 No alias not classified & original description: CDS=1-1716 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021596 No alias not classified & original description: CDS=1-2502 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023175 No alias not classified & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026929 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Sam_g02108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105729 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.06 OrthoFinder output from all 47 species
Spa_g04723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20461 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 201 226
IPR002885 Pentatricopeptide_repeat 173 193
IPR002885 Pentatricopeptide_repeat 677 703
IPR002885 Pentatricopeptide_repeat 72 95
IPR002885 Pentatricopeptide_repeat 274 298
IPR002885 Pentatricopeptide_repeat 302 330
IPR002885 Pentatricopeptide_repeat 502 548
IPR002885 Pentatricopeptide_repeat 401 447
IPR002885 Pentatricopeptide_repeat 98 146
IPR002885 Pentatricopeptide_repeat 603 649
No external refs found!