- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Ceric.1Z252700
Description : membrane trafficking factor *(GFS9) & original description: pacid=50565829 polypeptide=Ceric.1Z252700.1.p locus=Ceric.1Z252700 ID=Ceric.1Z252700.1.v2.1 annot-version=v2.1
Gene families : OG0003462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003462_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.1Z252700.1 | |
| Cluster | HCCA: Cluster_129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G28430 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g39003 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g32639 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g34035 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene06201.t1 | Aspi01Gene06201 | membrane trafficking factor *(GFS9) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene06204.t1 | Aspi01Gene06204 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene42412.t1 | Aspi01Gene42412 | membrane trafficking factor *(GFS9) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g014134 | No alias | membrane trafficking factor *(GFS9) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g05297 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g515250 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01968 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g01617 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029303001 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01033943001 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04682 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08189 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g11932 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Mp3g05320.1 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g15396 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31204 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015048 | No alias | membrane trafficking factor *(GFS9) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo405955 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g018100.2.1 | Solyc07g018100 | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11706 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040667_P003 | Zm00001e040667 | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0040008 | regulation of growth | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019155 | CLEC16A/TT9_N | 41 | 191 |
| No external refs found! |