Solyc07g042260.3.1 (Solyc07g042260.3)


Aliases : Solyc07g042260.3

Description : No description available


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g042260.3.1
Cluster HCCA cluster: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT1G34310 ARF12 auxin response factor 12 0.02 Gene family
AT1G34410 ARF21 auxin response factor 21 0.02 Gene family
AT1G35520 ARF15 auxin response factor 15 0.03 Gene family
AT2G28350 ARF10 auxin response factor 10 0.03 Gene family
AT4G23980 ARF9 auxin response factor 9 0.01 Gene family
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.02 Gene family
GSVIVT01004942001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc01g096070.3.1 Solyc01g096070.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc08g008380.3.1 Solyc08g008380.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d014013 GRMZM2G159399 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d036593 GRMZM2G089640 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 126 220
IPR033389 AUX/IAA_dom 793 890
IPR010525 Auxin_resp 214 279
No external refs found!