- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : pre-60S ribosomal subunit assembly factor *(NOP15) & original description: none
Gene families : OG0005172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005172_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g00626 | |
| Cluster | HCCA: Cluster_102 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g11954 | No alias | pre-60S ribosomal subunit assembly factor *(NOP15) &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0078.g038170 | No alias | pre-60S ribosomal subunit assembly factor *(NOP15) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cre08.g368500 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021851001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g13260.1 | No alias | pre-60S ribosomal subunit assembly factor (NOP15) | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13355 | No alias | pre-60S ribosomal subunit assembly factor *(NOP15) &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 44 | 110 |
| No external refs found! |