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  5. Ceric.1Z080900.1

Ceric.1Z080900.1 (MYBC1, Ceric.1Z080900)


Aliases : MYBC1, Ceric.1Z080900

Description : not classified & original description: pacid=50607904 polypeptide=Ceric.1Z080900.1.p locus=Ceric.1Z080900 ID=Ceric.1Z080900.1.v2.1 annot-version=v2.1


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z080900.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT5G49240 APRR4, PRR4 pseudo-response regulator 4 0.03 OrthoFinder output from all 47 species
Adi_g048194 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06631 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Aev_g12211 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19909.t1 ARR11, Aspi01Gene19909 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31778.t2 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.39G052700.1 MYBC1, Ceric.39G052700 MYB-RELATED transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000984.19 MYBC1 No description available 0.02 OrthoFinder output from all 47 species
Dcu_g47938 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04897 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08460 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025785001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_114951g0010 ARR11 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
MA_12161g0010 RR14, ARR14 Two-component response regulator ORR23 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_17547g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_601142g0010 RR2, ARR2 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
MA_92689g0020 RR14, ARR14 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05239 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.01 OrthoFinder output from all 47 species
Nbi_g06199 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Pir_g26959 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863 MYBC1 not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Solyc01g065540.3.1 ARR1, RR1, Solyc01g065540 B-type cytokinin ARR response activator. transcription... 0.06 OrthoFinder output from all 47 species
Solyc10g080960.1.1 Solyc10g080960 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e016123_P001 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e018507_P001 LUX, PCL1, Zm00001e018507 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 225 273
No external refs found!