Ceric.1Z072200.1 (Ceric.1Z072200)


Aliases : Ceric.1Z072200

Description : not classified & original description: pacid=50586493 polypeptide=Ceric.1Z072200.1.p locus=Ceric.1Z072200 ID=Ceric.1Z072200.1.v2.1 annot-version=v2.1


Gene families : OG0005121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005121_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z072200.1

Target Alias Description ECC score Gene Family Method Actions
AT5G11240 No alias transducin family protein / WD-40 repeat family protein 0.05 OrthoFinder output from all 47 species
Aev_g13801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g024031 No alias not classified & original description: CDS=168-2150 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000123.23 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g538500 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g09409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017246001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g18840.1 LOC_Os03g18840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g13113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g00060.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g09282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g116380.4.1 Solyc03g116380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e001372_P001 Zm00001e001372 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 12 33
IPR007148 SSU_processome_Utp12 493 595
No external refs found!