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  5. Ehy_g00575

Ehy_g00575 (emb1644)


Aliases : emb1644

Description : component *(LSm4) of U6-associated LSm accessory ribonucleoprotein complex & original description: none


Gene families : OG0005093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g00575
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cba_g25383 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Pnu_g29823 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Tin_g12470 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
Tin_g32880 emb1644 component *(LSm4) of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 7 71
No external refs found!