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Aliases : Ceric.1Z049500
Description : deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex & original description: pacid=50632687 polypeptide=Ceric.1Z049500.1.p locus=Ceric.1Z049500 ID=Ceric.1Z049500.1.v2.1 annot-version=v2.1
Gene families : OG0002208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002208_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.1Z049500.1 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G58560 | No alias | DNAse I-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12612 | No alias | deadenylase component *(CCR4) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_27365 | No alias | deadenylase component CCR4 of CCR4-NOT complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g27230.3 | LOC_Os10g27230 | deadenylase component CCR4 of CCR4-NOT complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g17770.1 | No alias | deadenylase component CCR4 of CCR4-NOT complex | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g059010.4.1 | Solyc03g059010 | deadenylase component CCR4 of CCR4-NOT complex | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10145 | No alias | deadenylase component *(CCR4) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005135 | Endo/exonuclease/phosphatase | 249 | 577 |
| No external refs found! |