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  5. Ceric.1Z028600.1

Ceric.1Z028600.1 (Ceric.1Z028600)


Aliases : Ceric.1Z028600

Description : not classified & original description: pacid=50582133 polypeptide=Ceric.1Z028600.1.p locus=Ceric.1Z028600 ID=Ceric.1Z028600.1.v2.1 annot-version=v2.1


Gene families : OG0016747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016747_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z028600.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Ala_g07328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15384 VAC1, ECB2, ATECB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 273 318
IPR002885 Pentatricopeptide_repeat 247 267
IPR002885 Pentatricopeptide_repeat 146 169
IPR002885 Pentatricopeptide_repeat 651 675
IPR002885 Pentatricopeptide_repeat 479 507
IPR002885 Pentatricopeptide_repeat 171 218
IPR002885 Pentatricopeptide_repeat 576 623
IPR002885 Pentatricopeptide_repeat 374 421
No external refs found!