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  5. Ceric.1Z019600.1

Ceric.1Z019600.1 (PETD, Ceric.1Z019600)


Aliases : PETD, Ceric.1Z019600

Description : component *(PetD/IV) of cytochrome b6/f complex & original description: pacid=50586393 polypeptide=Ceric.1Z019600.1.p locus=Ceric.1Z019600 ID=Ceric.1Z019600.1.v2.1 annot-version=v2.1


Gene families : OG0008554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008554_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z019600.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00730 PETD photosynthetic electron transfer D 0.19 OrthoFinder output from all 47 species
Als_g01331 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.07 OrthoFinder output from all 47 species
Ceric.05G041800.1 PETD, Ceric.05G041800 component *(PetD/IV) of cytochrome b6/f complex &... 0.12 OrthoFinder output from all 47 species
Ceric.05G051600.1 PETD, Ceric.05G051600 component *(PetD/IV) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Ceric.13G017000.1 PETD, Ceric.13G017000 component *(PetD/IV) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
Ceric.1Z163300.1 PETD, Ceric.1Z163300 not classified & original description: pacid=50596945... 0.09 OrthoFinder output from all 47 species
Ceric.32G035100.1 PETD, Ceric.32G035100 component *(PetD/IV) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Ceric.38G008500.1 PETD, Ceric.38G008500 component *(PetD/IV) of cytochrome b6/f complex &... 0.12 OrthoFinder output from all 47 species
Dcu_g47307 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.12 OrthoFinder output from all 47 species
LOC_Os01g57945.1 PETD, LOC_Os01g57945 component PetD/IV of cytochrome b6/f complex 0.18 OrthoFinder output from all 47 species
LOC_Os04g16844.1 PETD, LOC_Os04g16844 component PetD/IV of cytochrome b6/f complex 0.18 OrthoFinder output from all 47 species
LOC_Os08g15292.1 PETD, LOC_Os08g15292 component PetD/IV of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
LOC_Os10g21326.1 PETD, LOC_Os10g21326 component PetD/IV of cytochrome b6/f complex 0.18 OrthoFinder output from all 47 species
Mp1g00750.1 No alias Cytochrome b6-f complex subunit 4 OS=Pinus thunbergii... 0.05 OrthoFinder output from all 47 species
Ore_g03954 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.14 OrthoFinder output from all 47 species
Pir_g65515 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002259 PETD not classified & original description: CDS=1-288 0.1 OrthoFinder output from all 47 species
Sam_g10280 No alias component *(PetD/IV) of cytochrome b6/f complex &... 0.07 OrthoFinder output from all 47 species
Solyc00g500028.1.1 PETD, Solyc00g500028 Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.16 OrthoFinder output from all 47 species
Solyc00g500073.1.1 PETB, Solyc00g500073 Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.15 OrthoFinder output from all 47 species
Solyc00g500158.1.1 PETD, Solyc00g500158 component PetD/IV of cytochrome b6/f complex 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR005798 Cyt_b/b6_C 66 152
No external refs found!