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  5. Ceric.1Z013500.1

Ceric.1Z013500.1 (PUB13, ATPUB13, Ceric.1Z013500)


Aliases : PUB13, ATPUB13, Ceric.1Z013500

Description : E3 ubiquitin ligase & original description: pacid=50569373 polypeptide=Ceric.1Z013500.1.p locus=Ceric.1Z013500 ID=Ceric.1Z013500.1.v2.1 annot-version=v2.1


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z013500.1

Target Alias Description ECC score Gene Family Method Actions
AT1G71020 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g010019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05159 PUB12, AtPUB12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06113 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB15) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01345 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44183.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44184.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44185.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71894.t1 PUB8, B80,... E3 ubiquitin ligase *(PUB8) & original description: none 0.07 OrthoFinder output from all 47 species
Gb_29276 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Msp_g00627 PUB15 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07856 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15817 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Smo231208 PUB13, ATPUB13 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc02g079740.1.1 PUB8, B80, Solyc02g079740 U-box domain-containing protein 8 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc05g005670.1.1 Solyc05g005670 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Solyc06g076040.3.1 PUB13, ATPUB13,... E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Spa_g04508 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 549 582
IPR000225 Armadillo 426 464
IPR000225 Armadillo 384 423
IPR000225 Armadillo 467 505
IPR045766 MCAfunc 28 137
IPR003613 Ubox_domain 257 326
No external refs found!