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  5. Ceric.1Z004000.1

Ceric.1Z004000.1 (Ceric.1Z004000)


Aliases : Ceric.1Z004000

Description : not classified & original description: pacid=50628117 polypeptide=Ceric.1Z004000.1.p locus=Ceric.1Z004000 ID=Ceric.1Z004000.1.v2.1 annot-version=v2.1


Gene families : OG0007936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007936_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z004000.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g06970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13378 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01008674001 No alias Pentatricopeptide repeat-containing protein At1g76280... 0.03 OrthoFinder output from all 47 species
Gb_37339 No alias Pentatricopeptide repeat-containing protein At1g76280... 0.03 OrthoFinder output from all 47 species
LOC_Os09g29790.1 LOC_Os09g29790 Pentatricopeptide repeat-containing protein At1g76280... 0.08 OrthoFinder output from all 47 species
Lfl_g40600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g13850.1 No alias Pentatricopeptide repeat-containing protein At1g76280... 0.04 OrthoFinder output from all 47 species
Solyc04g082320.3.1 Solyc04g082320 Pentatricopeptide repeat-containing protein At1g76280... 0.07 OrthoFinder output from all 47 species
Zm00001e034440_P003 Zm00001e034440 Pentatricopeptide repeat-containing protein At1g76280... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 143
IPR002885 Pentatricopeptide_repeat 228 253
IPR002885 Pentatricopeptide_repeat 515 555
IPR002885 Pentatricopeptide_repeat 731 780
IPR002885 Pentatricopeptide_repeat 677 721
IPR002885 Pentatricopeptide_repeat 443 492
No external refs found!