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  5. Ceric.19G054900.1

Ceric.19G054900.1 (Ceric.19G054900)


Aliases : Ceric.19G054900

Description : not classified & original description: pacid=50576359 polypeptide=Ceric.19G054900.1.p locus=Ceric.19G054900 ID=Ceric.19G054900.1.v2.1 annot-version=v2.1


Gene families : OG0015119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.19G054900.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g70015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18364 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 587 632
IPR002885 Pentatricopeptide_repeat 184 224
IPR002885 Pentatricopeptide_repeat 688 735
IPR002885 Pentatricopeptide_repeat 983 1026
IPR002885 Pentatricopeptide_repeat 1085 1133
IPR002885 Pentatricopeptide_repeat 1224 1253
IPR002885 Pentatricopeptide_repeat 461 482
IPR002885 Pentatricopeptide_repeat 1327 1355
IPR002885 Pentatricopeptide_repeat 388 418
IPR002885 Pentatricopeptide_repeat 85 111
IPR002885 Pentatricopeptide_repeat 489 519
IPR002885 Pentatricopeptide_repeat 959 981
IPR002885 Pentatricopeptide_repeat 287 317
IPR002885 Pentatricopeptide_repeat 885 912
IPR002885 Pentatricopeptide_repeat 1188 1218
No external refs found!