1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.18G040700.1

Ceric.18G040700.1 (Ceric.18G040700)


Aliases : Ceric.18G040700

Description : not classified & original description: pacid=50621172 polypeptide=Ceric.18G040700.1.p locus=Ceric.18G040700 ID=Ceric.18G040700.1.v2.1 annot-version=v2.1


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.18G040700.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00128180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
AT5G01660 No alias CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,... 0.02 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032736001 No alias B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_10275 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 97.4) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.06 OrthoFinder output from all 47 species
LOC_Os06g07770.1 LOC_Os06g07770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g35610.1 LOC_Os07g35610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 94.4) 0.05 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g12406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15462 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_184449g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.02 OrthoFinder output from all 47 species
Msp_g13161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g015120.4.1 Solyc09g015120 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 105.0) 0.02 OrthoFinder output from all 47 species
Spa_g06576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 645 688
IPR006652 Kelch_1 603 641
IPR006652 Kelch_1 693 732
IPR006652 Kelch_1 550 595
IPR013989 Dev_and_cell_death_domain 40 168
No external refs found!