AMTR_s00138p00035380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00138.14

Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG_01_0000911 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000911_tree ,
OG_02_0000834 (LandPlants) Phylogenetic Tree(s): OG_02_0000834_tree ,
OG_03_0001753 (SeedPlants) Phylogenetic Tree(s): OG_03_0001753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00138p00035380
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
ATMG00550 ORF160 BEST Arabidopsis thaliana protein match is:... 0.02 Archaeplastida
GSVIVT01011588001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
Mp3g06700.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Mp3g17000.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.05 Archaeplastida
Solyc03g116440.3.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.02 Archaeplastida
Solyc04g008420.1.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.04 Archaeplastida
LOC_Os11g12650.1 No alias PHD finger transcription factor 0.01 LandPlants
Mp3g06700.1 No alias PHD finger transcription factor 0.01 LandPlants
Mp3g17000.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.03 LandPlants
Solyc03g116440.3.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.02 LandPlants
Solyc04g008420.1.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.02 LandPlants
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 SeedPlants
Solyc04g008420.1.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!