Ceric.18G013800.1 (Ceric.18G013800)

Aliases : Ceric.18G013800

Description : subfamily ABCB transporter & original description: pacid=50621260 polypeptide=Ceric.18G013800.1.p locus=Ceric.18G013800 ID=Ceric.18G013800.1.v2.1 annot-version=v2.1

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.18G013800.1
Cluster	HCCA: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
AMTR_s00045p00108620	PGP11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00048p00046670	PGP2,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00049p00128390	PGP16,...	ABC transporter B family member 16 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00049p00128460	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT1G02530	PGP12	P-glycoprotein 12	0.03	OrthoFinder output from all 47 species
AT2G36910	PGP1, ABCB1, ATPGP1	ATP binding cassette subfamily B1	0.04	OrthoFinder output from all 47 species
Adi_g010407	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g010452	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g105656	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g20821	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g39147	No alias	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g24244	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g05763	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g29915	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g68729	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08453.t1	PGP11, Aspi01Gene08453	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene42787.t1	ATPGP4, PGP4,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene46501.t2	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene62055.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62055.t2	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g01329	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g12428	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g25900	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28161	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g30302	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g13758	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01007586001	No alias	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
GSVIVT01028256001	PGP11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
LOC_Os02g46680.1	PGP2, LOC_Os02g46680	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Len_g23455	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_102299g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_126766g0010	PGP2	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_141308g0010	ABCB19,...	ABC transporter B family member 19 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_636449g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
MA_9148200g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp2g21430.1	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Msp_g19766	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g27262	PGP13	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g29224	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g29842	PGP10	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42482	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g60074	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07008	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.07	OrthoFinder output from all 47 species
Ppi_g17867	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g22415	ABCB19,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197	No alias	subfamily ABCB transporter & original description: CDS=1-2220	0.05	OrthoFinder output from all 47 species
Sam_g32980	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g48720	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo123915	PGP11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo231714	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc08g076720.4.1	PGP2, Solyc08g076720	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Spa_g19381	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e014797_P002	Zm00001e014797	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001897	cytolysis by symbiont of host cells	IEP	HCCA
BP	GO:0001907	killing by symbiont of host cells	IEP	HCCA
BP	GO:0019836	hemolysis by symbiont of host erythrocytes	IEP	HCCA
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0051701	biological process involved in interaction with host	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	412	560
IPR003439	ABC_transporter-like_ATP-bd	1041	1190
IPR011527	ABC1_TM_dom	703	971
IPR011527	ABC1_TM_dom	68	339

External Links

No external refs found!

Ceric.18G013800.1 (Ceric.18G013800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation