Aliases : MED34, ATRECQ2, RECQL2, Ceric.18G010900
Description : not classified & original description: pacid=50621519 polypeptide=Ceric.18G010900.1.p locus=Ceric.18G010900 ID=Ceric.18G010900.1.v2.1 annot-version=v2.1
Gene families : OG0007173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007173_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00077p00186260 | ATRECQ4A,... | ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
Aop_g69305 | ATRECQ4A, ATSGS1, RECQ4A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0004.g008369 | MED34, ATRECQ2, RECQL2 | not classified & original description: CDS=95-2653 | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020961.28 | RecQl3, ATRECQ3 | ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g490150 | RecQl3, ATRECQ3 | ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os07g48360.1 | MED34, ATRECQ2,... | Mediator of RNA polymerase II transcription subunit 34... | 0.07 | OrthoFinder output from all 47 species | |
Len_g20646 | MED34, ATRECQ2, RECQL2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_10429752g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Mp2g02390.1 | MED34, ATRECQ2, RECQL2 | Mediator of RNA polymerase II transcription subunit 34... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0055.g014366 | MED34, ATRECQ2, RECQL2 | not classified & original description: CDS=173-2734 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16336 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035873_P003 | MED34, ATRECQ2,... | ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006260 | DNA replication | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
MF | GO:0043138 | 3'-5' DNA helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0031491 | nucleosome binding | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
No external refs found! |