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  5. Ceric.18G005800.1

Ceric.18G005800.1 (Ceric.18G005800)


Aliases : Ceric.18G005800

Description : RNA polymerase-IV-positioning factor *(SHH) & original description: pacid=50621314 polypeptide=Ceric.18G005800.1.p locus=Ceric.18G005800 ID=Ceric.18G005800.1.v2.1 annot-version=v2.1


Gene families : OG0001794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001794_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Ceric.18G005800.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000230 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g29020.1 LOC_Os06g29020 RNA polymerase-IV-positioning factor (SHH).... 0.03 OrthoFinder output from all 47 species
Sam_g00809 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Solyc10g007130.4.1 Solyc10g007130 RNA polymerase-IV-positioning factor (SHH).... 0.04 OrthoFinder output from all 47 species
Zm00001e033896_P001 Zm00001e033896 RNA polymerase-IV-positioning factor (SHH).... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 137 264
No external refs found!