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  5. Ceric.18G000300.1

Ceric.18G000300.1 (Ceric.18G000300)


Aliases : Ceric.18G000300

Description : ssDNA-binding protein *(OSB) & original description: pacid=50622281 polypeptide=Ceric.18G000300.1.p locus=Ceric.18G000300 ID=Ceric.18G000300.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.18G000300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
Ala_g11260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024336 CRR22 not classified & original description: CDS=1-759 0.03 OrthoFinder output from all 47 species
Azfi_s0109.g045292 No alias not classified & original description: CDS=1-1236 0.03 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.05 OrthoFinder output from all 47 species
Ceric.15G021100.1 Ceric.15G021100 not classified & original description: pacid=50639951... 0.04 OrthoFinder output from all 47 species
Ceric.35G035600.1 Ceric.35G035600 not classified & original description: pacid=50580802... 0.06 OrthoFinder output from all 47 species
Dcu_g21452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_858608g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 72 100
IPR002885 Pentatricopeptide_repeat 132 180
No external refs found!