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  5. Ceric.17G047600.1

Ceric.17G047600.1 (PA200, Ceric.17G047600)


Aliases : PA200, Ceric.17G047600

Description : proteasome core particle assembly factor *(PA200) & original description: pacid=50617837 polypeptide=Ceric.17G047600.1.p locus=Ceric.17G047600 ID=Ceric.17G047600.1.v2.1 annot-version=v2.1


Gene families : OG0001792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001792_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G047600.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT3G13330 PA200 proteasome activating protein 200 0.05 OrthoFinder output from all 47 species
Adi_g001200 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Ala_g02718 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Ala_g04614 PA200 proteasome core particle assembly factor *(PA200) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene50961.t1 PA200, Aspi01Gene50961 proteasome core particle assembly factor *(PA200) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene50962.t1 PA200, Aspi01Gene50962 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62922.t1 PA200, Aspi01Gene62922 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62923.t1 PA200, Aspi01Gene62923 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011664 PA200 proteasome core particle assembly factor *(PA200) &... 0.05 OrthoFinder output from all 47 species
Azfi_s0197.g057334 PA200 proteasome core particle assembly factor *(PA200) &... 0.05 OrthoFinder output from all 47 species
Cba_g13867 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Cre14.g628702 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Dcu_g04998 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Dde_g10206 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Gb_04235 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_28178 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_28179 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_28180 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_28181 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_28182 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Len_g11444 PA200 proteasome core particle assembly factor *(PA200) &... 0.07 OrthoFinder output from all 47 species
Len_g14735 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Lfl_g35781 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
MA_10429645g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433922g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_51487g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp2g23560.1 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g14651 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Ore_g17276 PA200 proteasome core particle assembly factor *(PA200) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011208 PA200 proteasome core particle assembly factor *(PA200) &... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016437 PA200 proteasome core particle assembly factor *(PA200) &... 0.08 OrthoFinder output from all 47 species
Smo179234 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Smo236562 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc07g066030.4.1 PA200, Solyc07g066030 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07611 PA200 proteasome core particle assembly factor *(PA200) &... 0.06 OrthoFinder output from all 47 species
Zm00001e031009_P002 PA200, Zm00001e031009 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR021843 PSME4_C 1726 1811
IPR032430 Blm10_mid 317 518
IPR032430 Blm10_mid 525 824
No external refs found!