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  5. Ceric.17G046000.1

Ceric.17G046000.1 (ATCAF1, CAF1, Ceric.17G046000)


Aliases : ATCAF1, CAF1, Ceric.17G046000

Description : not classified & original description: pacid=50617225 polypeptide=Ceric.17G046000.1.p locus=Ceric.17G046000 ID=Ceric.17G046000.1.v2.1 annot-version=v2.1


Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G046000.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g13815 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.02 OrthoFinder output from all 47 species
Aop_g60711 ATCAF1, CAF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18814.t1 ATCAF1, CAF1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04004 ATCAF1, CAF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06914 CAF2, ATCAF2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g72184 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.02 OrthoFinder output from all 47 species
Dac_g10639 ATCAF1, CAF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14796 ATCAF1, CAF1 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.03 OrthoFinder output from all 47 species
Dde_g14923 ATCAF1, CAF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02479 ATCAF1, CAF1 mCSF mitochondrial RNA splicing factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g19169 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015331001 ATCAF1, CAF1 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
LOC_Os08g07790.1 LOC_Os08g07790 mCSF mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
MA_757065g0010 CAF2, ATCAF2 CRS2-associated factor 2, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Pir_g08475 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.02 OrthoFinder output from all 47 species
Pir_g12535 ATCAF1, CAF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05287 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.03 OrthoFinder output from all 47 species
Ppi_g29789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56937 CAF2, ATCAF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10709 ATCAF1, CAF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12704 ATCAF1, CAF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 220 303
IPR001890 RNA-binding_CRM 339 421
No external refs found!