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  5. Ceric.17G019700.1

Ceric.17G019700.1 (Ceric.17G019700)


Aliases : Ceric.17G019700

Description : not classified & original description: pacid=50618170 polypeptide=Ceric.17G019700.1.p locus=Ceric.17G019700 ID=Ceric.17G019700.1.v2.1 annot-version=v2.1


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G019700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Cba_g33322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G048600.1 Ceric.39G048600 not classified & original description: pacid=50582455... 0.05 OrthoFinder output from all 47 species
GSVIVT01024778001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 OrthoFinder output from all 47 species
Gb_32897 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g59380.1 LOC_Os04g59380 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g13834 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023140 No alias not classified & original description: CDS=905-2272 0.03 OrthoFinder output from all 47 species
Solyc04g081370.2.1 Solyc04g081370 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Tin_g07821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008786_P002 Zm00001e008786 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!