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  5. Ceric.16G079400.1

Ceric.16G079400.1 (Ceric.16G079400)


Aliases : Ceric.16G079400

Description : E3 ubiquitin ligase *(PIR) & original description: pacid=50590152 polypeptide=Ceric.16G079400.1.p locus=Ceric.16G079400 ID=Ceric.16G079400.1.v2.1 annot-version=v2.1


Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G079400.1

Target Alias Description ECC score Gene Family Method Actions
AT4G03000 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g084041 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09061 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44095 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os05g04950.1 LOC_Os05g04950 Putative E3 ubiquitin-protein ligase RF298... 0.06 OrthoFinder output from all 47 species
Pir_g17835 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12679 No alias E3 ubiquiTin ligase *(PIR) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046527 PIR2-like_helical 155 263
No external refs found!