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  5. Ceric.16G078800.1

Ceric.16G078800.1 (SYP21, ATSYP21,...)


Aliases : SYP21, ATSYP21, PEP12, ATPEP12, PEP12P, Ceric.16G078800

Description : Qa-type SYP2-group component of SNARE membrane fusion complex & original description: pacid=50589165 polypeptide=Ceric.16G078800.1.p locus=Ceric.16G078800 ID=Ceric.16G078800.1.v2.1 annot-version=v2.1


Gene families : OG0001469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G078800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242400 SYP21, ATSYP21,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
AMTR_s00062p00084940 VAM3, ATVAM3,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT5G46860 VAM3, ATVAM3,... Syntaxin/t-SNARE family protein 0.03 OrthoFinder output from all 47 species
Adi_g014633 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g16776 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Len_g04655 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sam_g28690 No alias Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g29482 No alias Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Solyc06g062360.3.1 VAM3, ATVAM3,... SYP2-group Qa-type SNARE component 0.01 OrthoFinder output from all 47 species
Solyc11g066910.3.1 VAM3, ATVAM3,... SYP2-group Qa-type SNARE component 0.01 OrthoFinder output from all 47 species
Zm00001e025575_P001 VAM3, ATVAM3,... SYP2-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 29 126
IPR000727 T_SNARE_dom 214 265
No external refs found!