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  5. Ceric.16G078600.1

Ceric.16G078600.1 (BARD1, ROW1, ATBARD1,...)


Aliases : BARD1, ROW1, ATBARD1, Ceric.16G078600

Description : component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination heterodimer & original description: pacid=50589447 polypeptide=Ceric.16G078600.1.p locus=Ceric.16G078600 ID=Ceric.16G078600.1.v2.1 annot-version=v2.1


Gene families : OG0001776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G078600.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00180030 BRCA1, ATBRCA1,... DNA damage response.BRCA1–BARD1 DNA-damage response... 0.05 OrthoFinder output from all 47 species
AMTR_s00092p00067800 BRCA1, ATBRCA1,... DNA damage response.BRCA1–BARD1 DNA-damage response... 0.06 OrthoFinder output from all 47 species
AT1G04020 BARD1, ROW1, ATBARD1 breast cancer associated RING 1 0.08 OrthoFinder output from all 47 species
AT4G21070 BRCA1, ATBRCA1 breast cancer susceptibility1 0.04 OrthoFinder output from all 47 species
Aev_g22116 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.05 OrthoFinder output from all 47 species
Als_g16524 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.1 OrthoFinder output from all 47 species
Aop_g08732 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.09 OrthoFinder output from all 47 species
Aop_g10443 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.06 OrthoFinder output from all 47 species
Aspi01Gene06963.t1 BRCA1, ATBRCA1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.07 OrthoFinder output from all 47 species
Aspi01Gene29593.t1 BRCA1, ATBRCA1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.09 OrthoFinder output from all 47 species
Aspi01Gene40923.t1 BARD1, ROW1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.01 OrthoFinder output from all 47 species
Azfi_s0004.g008694 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.14 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 OrthoFinder output from all 47 species
Cre07.g334650 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.01 OrthoFinder output from all 47 species
Dac_g10577 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.07 OrthoFinder output from all 47 species
Dac_g15330 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.05 OrthoFinder output from all 47 species
Dcu_g10242 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.19 OrthoFinder output from all 47 species
Dcu_g42186 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Gb_00493 BRCA1, ATBRCA1 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.11 OrthoFinder output from all 47 species
LOC_Os04g43300.1 BARD1, ROW1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.12 OrthoFinder output from all 47 species
LOC_Os05g43610.1 BRCA1, ATBRCA1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.05 OrthoFinder output from all 47 species
Len_g11293 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.06 OrthoFinder output from all 47 species
MA_12220g0020 BRCA1, ATBRCA1 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.1 OrthoFinder output from all 47 species
MA_187851g0010 BRCA1, ATBRCA1 Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... 0.07 OrthoFinder output from all 47 species
MA_66542g0010 BRCA1, ATBRCA1 Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... 0.06 OrthoFinder output from all 47 species
Mp1g00070.1 BRCA1, ATBRCA1 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.13 OrthoFinder output from all 47 species
Msp_g15829 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.1 OrthoFinder output from all 47 species
Nbi_g12141 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Nbi_g26771 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.14 OrthoFinder output from all 47 species
Ppi_g16822 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007705 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018874 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.09 OrthoFinder output from all 47 species
Smo414577 BARD1, ROW1, ATBARD1 Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Solyc06g008210.4.1 BARD1, ROW1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.08 OrthoFinder output from all 47 species
Spa_g04261 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.11 OrthoFinder output from all 47 species
Tin_g03296 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... 0.04 OrthoFinder output from all 47 species
Tin_g32798 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... 0.09 OrthoFinder output from all 47 species
Zm00001e007590_P001 BARD1, ROW1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.06 OrthoFinder output from all 47 species
Zm00001e032102_P001 BRCA1, ATBRCA1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 563 638
No external refs found!