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  5. Ceric.16G078200.1

Ceric.16G078200.1 (Ceric.16G078200)


Aliases : Ceric.16G078200

Description : not classified & original description: pacid=50589543 polypeptide=Ceric.16G078200.1.p locus=Ceric.16G078200 ID=Ceric.16G078200.1.v2.1 annot-version=v2.1


Gene families : OG0011717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G078200.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Adi_g080034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12502g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 180 225
IPR002885 Pentatricopeptide_repeat 244 281
IPR002885 Pentatricopeptide_repeat 390 437
IPR002885 Pentatricopeptide_repeat 570 616
IPR002885 Pentatricopeptide_repeat 76 123
IPR002885 Pentatricopeptide_repeat 365 386
IPR002885 Pentatricopeptide_repeat 544 569
IPR002885 Pentatricopeptide_repeat 490 515
IPR002885 Pentatricopeptide_repeat 467 488
IPR002885 Pentatricopeptide_repeat 153 174
IPR002885 Pentatricopeptide_repeat 51 72
IPR018184 Integrin_alpha_C_CS 475 484
IPR018184 Integrin_alpha_C_CS 161 170
No external refs found!