Ceric.16G078000.1 (PNH, AGO10, ZLL,...)


Aliases : PNH, AGO10, ZLL, Ceric.16G078000

Description : not classified & original description: pacid=50589285 polypeptide=Ceric.16G078000.1.p locus=Ceric.16G078000 ID=Ceric.16G078000.1.v2.1 annot-version=v2.1


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G078000.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00049370 AGO1,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AMTR_s00122p00122810 PNH, AGO10, ZLL,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Aop_g29550 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043652 AGO1 not classified & original description: CDS=139-2811 0.04 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os04g06770.2 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.06 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os06g39640.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os07g16224.1 AGO9, LOC_Os07g16224 siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Len_g40869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52026 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Spa_g12542 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Spa_g51306 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Zm00001e025496_P001 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR032474 Argonaute_N 33 162
IPR032472 ArgoL2 370 416
IPR003165 Piwi 515 848
IPR014811 ArgoL1 174 221
IPR032473 Argonaute_Mid_dom 425 502
IPR003100 PAZ_dom 253 359
No external refs found!