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  5. Ceric.16G071800.1

Ceric.16G071800.1 (SHM4, Ceric.16G071800)


Aliases : SHM4, Ceric.16G071800

Description : EC_2.1 transferase transferring one-carbon group & original description: pacid=50590264 polypeptide=Ceric.16G071800.1.p locus=Ceric.16G071800 ID=Ceric.16G071800.1.v2.1 annot-version=v2.1


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G071800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00262120 SHM4,... Amino acid metabolism.biosynthesis.serine... 0.05 OrthoFinder output from all 47 species
AT4G13930 SHM4 serine hydroxymethyltransferase 4 0.06 OrthoFinder output from all 47 species
Aop_g08717 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Cre06.g293950 SHM4 Amino acid metabolism.biosynthesis.serine... 0.05 OrthoFinder output from all 47 species
Dcu_g23927 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
GSVIVT01009226001 STM, SHM1, SHMT1 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
GSVIVT01021046001 SHM4 Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os11g26860.1 SHM4, LOC_Os11g26860 Serine hydroxymethyltransferase 4 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Len_g24771 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Lfl_g01520 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
MA_11357g0010 SHM4 serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
Msp_g00555 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g04285 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ore_g20456 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Smo166496 SHM4 Amino acid metabolism.biosynthesis.serine... 0.04 OrthoFinder output from all 47 species
Spa_g04332 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Spa_g30099 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Zm00001e021483_P001 SHM4, Zm00001e021483 serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 14 413
No external refs found!