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  5. Ceric.16G065500.1

Ceric.16G065500.1 (Ceric.16G065500)


Aliases : Ceric.16G065500

Description : not classified & original description: pacid=50589139 polypeptide=Ceric.16G065500.1.p locus=Ceric.16G065500 ID=Ceric.16G065500.1.v2.1 annot-version=v2.1


Gene families : OG0004822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004822_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G065500.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Ala_g01259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0144.g051555 No alias not classified & original description: CDS=30-842 0.03 OrthoFinder output from all 47 species
Ceric.08G008000.1 Ceric.08G008000 not classified & original description: pacid=50637759... 0.04 OrthoFinder output from all 47 species
Pir_g14384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 366 396
IPR001876 Znf_RanBP2 80 107
IPR001876 Znf_RanBP2 295 321
No external refs found!