Solyc07g021220.2.1 (Solyc07g021220.2)


Aliases : Solyc07g021220.2

Description : 27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1


Gene families : OG_01_0003439 (Gene family) Phylogenetic Tree(s): OG0003439_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g021220.2.1
Cluster HCCA cluster: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
ATCG00180 RPOC1 DNA-directed RNA polymerase family protein 0.16 Gene family
GSVIVT01000405001 No alias 27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1 0.02 Gene family
Solyc01g017390.2.1 Solyc01g017390.2 27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1 0.02 Gene family
Solyc01g017470.2.1 Solyc01g017470.2 27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1 0.02 Gene family
Solyc08g014390.1.1 Solyc08g014390.1 27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1 0.02 Gene family
Solyc10g031560.1.1 Solyc10g031560.1 27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA InterProScan
BP GO:0006351 transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 61 99
No external refs found!