1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.16G051900.1

Ceric.16G051900.1 (Ceric.16G051900)


Aliases : Ceric.16G051900

Description : E3 ubiquitin ligase *(AIRP1) & original description: pacid=50589478 polypeptide=Ceric.16G051900.1.p locus=Ceric.16G051900 ID=Ceric.16G051900.1.v2.1 annot-version=v2.1


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G051900.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT2G37820 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT5G43520 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
Azfi_s0408.g068454 No alias not classified & original description: CDS=95-1408 0.04 OrthoFinder output from all 47 species
Gb_35538 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g31280.1 LOC_Os08g31280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g097960.1.1 Solyc03g097960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g21972 No alias E3 ubiquiTin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 302 344
IPR004146 DC1 56 102
IPR004146 DC1 3 46
IPR004146 DC1 112 159
No external refs found!