1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.16G031400.1

Ceric.16G031400.1 (Ceric.16G031400)


Aliases : Ceric.16G031400

Description : not classified & original description: pacid=50589889 polypeptide=Ceric.16G031400.1.p locus=Ceric.16G031400 ID=Ceric.16G031400.1.v2.1 annot-version=v2.1


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G031400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.05 OrthoFinder output from all 47 species
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g14519 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12777.t1 Aspi01Gene12777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 OrthoFinder output from all 47 species
Nbi_g19610 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g36090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012097 No alias not classified & original description: CDS=661-1995 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015623 No alias not classified & original description: CDS=1-2238 0.03 OrthoFinder output from all 47 species
Spa_g15195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 875 936
IPR002885 Pentatricopeptide_repeat 946 1003
IPR002885 Pentatricopeptide_repeat 716 739
IPR002885 Pentatricopeptide_repeat 647 671
IPR002885 Pentatricopeptide_repeat 821 850
IPR002885 Pentatricopeptide_repeat 612 635
IPR033443 PPR_long 448 611
No external refs found!