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  5. Ceric.16G011400.1

Ceric.16G011400.1 (Ceric.16G011400)


Aliases : Ceric.16G011400

Description : not classified & original description: pacid=50589110 polypeptide=Ceric.16G011400.1.p locus=Ceric.16G011400 ID=Ceric.16G011400.1.v2.1 annot-version=v2.1


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G011400.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00054340 evm_27.TU.AmTr_v1... PsbP domain-containing protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.11 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g08526 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g18492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021682.6 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g12329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.15 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Lfl_g05889 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
MA_135370g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g10040.1 No alias PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g30711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.05 OrthoFinder output from all 47 species
Sam_g35958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g15416 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 100 259
No external refs found!