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  5. Ceric.16G005300.1

Ceric.16G005300.1 (AGL65, Ceric.16G005300)


Aliases : AGL65, Ceric.16G005300

Description : MADS/AGL-type transcription factor & original description: pacid=50588943 polypeptide=Ceric.16G005300.1.p locus=Ceric.16G005300 ID=Ceric.16G005300.1.v2.1 annot-version=v2.1


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G005300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00127p00060060 SVP, AGL22,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g042402 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089152 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49430 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14271 AGL104 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18076 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37797 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06307.t1 ANR1, AGL44,... MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49767.t1 STK, AGL11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72145.t2 AGL30, Aspi01Gene72145 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16031 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g33793 AGL14 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37029 AGL16 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g59818 AGL30 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G051700.1 Ceric.12G051700 not classified & original description: pacid=50600703... 0.01 OrthoFinder output from all 47 species
Ceric.14G038200.1 AGL87, Ceric.14G038200 MADS/AGL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dac_g27888 AGL30 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36626 AGL16 MADS/AGL-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g51026 AGL42 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002442001 AGL24 RNA biosynthesis.transcriptional activation.MADS box... 0.07 OrthoFinder output from all 47 species
GSVIVT01008139001 AGL2, SEP1 RNA biosynthesis.transcriptional activation.MADS box... 0.01 OrthoFinder output from all 47 species
GSVIVT01008806001 PI RNA biosynthesis.transcriptional activation.MADS box... 0.01 OrthoFinder output from all 47 species
GSVIVT01012250001 AGL7, AP1 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01018450001 AGL6 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01019883001 GL19, AGL19 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01027577001 AGL6 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
LOC_Os11g43740.1 AGL65, LOC_Os11g43740 transcription factor (MADS/AGL) 0.01 OrthoFinder output from all 47 species
Len_g59047 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g22329 AGL32, TT16, ABS MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38459 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42364 STK, AGL11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62136 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002217 AGL15 MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g27238 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06302 AGL6 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12713 AGL21 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26308 AGL15 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49382 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030839_P001 AGL66, Zm00001e030839 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 5 52
No external refs found!