1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.16G003500.1

Ceric.16G003500.1 (LBD4, Ceric.16G003500)


Aliases : LBD4, Ceric.16G003500

Description : AS2/LOB-type transcription factor & original description: pacid=50589161 polypeptide=Ceric.16G003500.1.p locus=Ceric.16G003500 ID=Ceric.16G003500.1.v2.1 annot-version=v2.1


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G003500.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0076.g037915 LBD20 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01016335001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01027620001 LBD19 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
MA_88659g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 11 108
No external refs found!