Ceric.15G063000.1 (KNAT4, Ceric.15G063000)

Aliases : KNAT4, Ceric.15G063000

Description : KNOX-type transcription factor & original description: pacid=50640007 polypeptide=Ceric.15G063000.1.p locus=Ceric.15G063000 ID=Ceric.15G063000.1.v2.1 annot-version=v2.1

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.15G063000.1
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00085p00165180	KNAT6, KNAT6L,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
AT1G62360	BUM1, SHL, STM,...	KNOX/ELK homeobox transcription factor	0.03	OrthoFinder output from all 47 species
AT4G32040	KNAT5	KNOTTED1-like homeobox gene 5	0.03	OrthoFinder output from all 47 species
Aev_g04111	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g02808	No alias	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g13041	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g16044	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0022.g016023	KNAT6, KNAT6L, KNAT6S	not classified & original description: CDS=247-1020	0.04	OrthoFinder output from all 47 species
Azfi_s0350.g066569	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: CDS=1-1488	0.03	OrthoFinder output from all 47 species
Azfi_s0637.g080498	KNAT4	KNOX-type transcription factor & original description: CDS=1-810	0.04	OrthoFinder output from all 47 species
GSVIVT01004811001	BUM1, SHL, STM,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01009273001	BP, BP1, KNAT1	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
GSVIVT01019880001	KNAT7, IXR11	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
GSVIVT01030488001	BUM1, SHL, STM,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
GSVIVT01031241001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_10887	BP, BP1, KNAT1	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
LOC_Os03g03164.2	KNAT7, IXR11,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
LOC_Os03g47042.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
LOC_Os05g03884.1	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species
Msp_g44272	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g05715	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25139	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g25497	KNAT4	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g36039	KNAT4	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g37281	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g62008	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16367	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019792	KNAT7, IXR11	not classified & original description: CDS=1-462	0.03	OrthoFinder output from all 47 species
Sam_g01264	No alias	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g45614	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e029453_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	508	547
IPR005541	KNOX2	342	391

External Links

No external refs found!

Ceric.15G063000.1 (KNAT4, Ceric.15G063000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation