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  5. Ceric.15G052100.1

Ceric.15G052100.1 (Ceric.15G052100)


Aliases : Ceric.15G052100

Description : not classified & original description: pacid=50640703 polypeptide=Ceric.15G052100.1.p locus=Ceric.15G052100 ID=Ceric.15G052100.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.15G052100.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Ala_g11260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.04 OrthoFinder output from all 47 species
Ceric.10G029700.1 Ceric.10G029700 not classified & original description: pacid=50613292... 0.04 OrthoFinder output from all 47 species
Ceric.12G084700.1 Ceric.12G084700 not classified & original description: pacid=50602071... 0.04 OrthoFinder output from all 47 species
Ceric.16G079900.1 Ceric.16G079900 not classified & original description: pacid=50589742... 0.05 OrthoFinder output from all 47 species
Ceric.36G001100.1 Ceric.36G001100 not classified & original description: pacid=50568746... 0.04 OrthoFinder output from all 47 species
Dcu_g07128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45843 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Ore_g13992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 366 392
IPR002885 Pentatricopeptide_repeat 88 136
IPR002885 Pentatricopeptide_repeat 290 336
IPR002885 Pentatricopeptide_repeat 189 236
No external refs found!