Solyc07g018300.3.1 (Solyc07g018300.3)


Aliases : Solyc07g018300.3

Description : 28.2 DNA.repair Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1. replicon protein A2 (RPA2)


Gene families : OG_01_0002004 (Gene family) Phylogenetic Tree(s): OG0002004_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g018300.3.1
Cluster HCCA cluster: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT2G24490 ATRPA2,... replicon protein A2 0.02 Gene family
Cpa|evm.model.tig00020684.26 No alias 29.1 protein.aa activation RPA32B 0.08 Gene family
Cre02.g100000 No alias 29.1 protein.aa activation RPA32B 0.1 Gene family
GSVIVT01035537001 No alias 28.2 DNA.repair Encodes a component of Replication... 0.21 Gene family
LOC_Os02g58220 Os02g0829100 28.2 DNA.repair Encodes a component of Replication... 0.08 Gene family
LOC_Os06g47830 Os06g0693300 28.2 DNA.repair Encodes a component of Replication... 0.05 Gene family
Smo440021 PACid_15401840 28.2 DNA.repair Encodes a component of Replication... 0.05 Gene family
Zm00001d014584 GRMZM2G061485 No description available 0.01 Gene family
Zm00001d018531 GRMZM2G445958 No description available 0.12 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 86 144
IPR014892 RPA_C 177 264
No external refs found!