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  5. Ceric.15G032400.1

Ceric.15G032400.1 (ATUBC1, UBC1, Ceric.15G032400)


Aliases : ATUBC1, UBC1, Ceric.15G032400

Description : E2 ubiquitin-conjugating enzyme *(UBC1) & original description: pacid=50640349 polypeptide=Ceric.15G032400.1.p locus=Ceric.15G032400 ID=Ceric.15G032400.1.v2.1 annot-version=v2.1


Gene families : OG0003855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.15G032400.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g02708 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009363 ATUBC1, UBC1 not classified & original description: CDS=185-649 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037796 ATUBC1, UBC1 not classified & original description: CDS=102-560 0.04 OrthoFinder output from all 47 species
Lfl_g30190 ATUBC1, UBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g13120.1 ATUBC1, UBC1 Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Nbi_g09271 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g08622 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g023022 ATUBC1, UBC1 not classified & original description: CDS=193-651 0.04 OrthoFinder output from all 47 species
Smo185331 ATUBC1, UBC1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g54420 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 150
No external refs found!