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  5. Ceric.15G004900.1

Ceric.15G004900.1 (ATRHM2, RHM2, ATMUM4,...)


Aliases : ATRHM2, RHM2, ATMUM4, MUM4, Ceric.15G004900

Description : UDP-L-rhamnose synthase *(RHM) & original description: pacid=50639371 polypeptide=Ceric.15G004900.1.p locus=Ceric.15G004900 ID=Ceric.15G004900.1.v2.1 annot-version=v2.1


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.15G004900.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Adi_g108283 NRS/ER, UER1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13357 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g02128 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05083 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g18717 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14366 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18471.t1 RHM1, ROL1,... UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G016100.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.33G035200.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g13740 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43230 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014091001 ATRHM3, RHM3 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Len_g10910 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10431444g0010 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.01 OrthoFinder output from all 47 species
MA_217856g0010 NRS/ER, UER1 UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species
Mp1g04880.1 NRS/ER, UER1 UDP-L-rhamnose synthase 0.07 OrthoFinder output from all 47 species
Mp6g02720.1 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
Ore_g30896 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10663 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56481 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005330 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g10633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13458 No alias UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Smo266803 RHM1, ROL1, ATRHM1 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Solyc08g069110.3.1 RHM1, ROL1,... UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Spa_g01511 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05877 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24187 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49046 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015435_P001 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 9 315
IPR001509 Epimerase_deHydtase 373 517
No external refs found!