Solyc07g017760.1.1 (Solyc07g017760.1)


Aliases : Solyc07g017760.1

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003255 (Gene family) Phylogenetic Tree(s): OG0003255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g017760.1.1
Cluster HCCA cluster: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT2G18940 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT5G02860 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
GSVIVT01029248001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os05g19380 Os05g0275000 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_6146g0010 No alias No description available 0.04 Gene family
MA_96691g0010 No alias No description available 0.03 Gene family
Zm00001d036698 GRMZM2G177169 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 716 748
IPR002885 Pentatricopeptide_repeat 302 331
IPR002885 Pentatricopeptide_repeat 334 381
IPR002885 Pentatricopeptide_repeat 754 803
IPR002885 Pentatricopeptide_repeat 544 592
IPR002885 Pentatricopeptide_repeat 474 521
IPR002885 Pentatricopeptide_repeat 396 453
IPR002885 Pentatricopeptide_repeat 225 277
IPR002885 Pentatricopeptide_repeat 639 696
No external refs found!